PREDICTING THE BIODEGRADABILITY NATURE OF IMIDAZOLE AND ITS DERIVATIVES BY MODULATING TWO HISTIDINE DEGRADATION ENZYMES (UROCANASE AND FORMIMINOGLUTAMASE) ACTIVITIES

Authors

  • Vijayakumar Veeraragavan Department of Chemistry, Organic Chemistry Laboratory, Veltech Dr. RR and Dr. SR University, Avadi, Chennai, Tamil Nadu, India.
  • Radhakrishnan Narayanaswamy Bio Waste Management Laboratory, Vel Tech Technology Incubator, Veltech Dr. RR and Dr. SR, University, Avadi, Chennai, Tamil Nadu, India.
  • Rameshkumar Chidambaram Department of Chemistry, Organic Chemistry Laboratory, Veltech Dr. RR and Dr. SR University, Avadi, Chennai, Tamil Nadu, India.

DOI:

https://doi.org/10.22159/ajpcr.2017.v10i11.20999

Keywords:

Biodegradation, Urocanase, Formiminoglutamase, Histidine degradation pathway, Imidazole derivatives

Abstract

Objectives: The biodegradation pathway of substituted imidazole ring compounds has been reported to have close analogy to the histidine degradation pathway. This prompted the present study to be carried out on 12 selected imidazole and its derivatives which are 1-imidazole, 1, 2-dimethylimidazole, 1-ethyl imidazole, 2-ethyl-4-methylimidazole, 2-isopropylimidazole, 2-Isopropyl-4-nitro-1H-imidazole, 1-methylimidazole, 2-methyl-5-nitroimidazole, 2-methyl-1-vinylimidazole, 1-nitro imidazole, 1-phenyl imidazole, and 1-vinylimidazole.

Methods: The imidazole and its derivatives were evaluated on the docking behavior of urocanase and formiminoglutamase using PatchDock. In addition, molecular physicochemical, drug-likeness, absorption, distribution, metabolism, and excretion analyses (ADME) were done.

Results: The molecular physicochemical analysis revealed that all the tested ligands showed nil violation and complied well with the Lipinski's rule of five. ADME analysis showed that 1-phenylimidazole alone predicated to have cytochrome P450 1A2 inhibition effect. Docking studies revealed that 1-nitroimidazole showed the least atomic contact energy with both targeted enzymes (urocanase and FIGase).

Conclusion: Inhibition of both enzymes (urocanase and FIGase) might show poor biodegradability nature. Thus, we can predict biodegradability nature of imidazloe and its derivatives by modulating two histidine degradation enzymes activities.

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References

Shalini K, Sharma PK, Kumar N. Imidazole and its biological activities: A review. Chem Sin 2010;1(3):36-47.

Bhatnagar A, Sharma PK, Kumar N. A review on Imidazolesâ€: Their chemistry and pharmacological potentials. Int J Pharm Tech Res 2011;3(1):268-82.

El-Aal EA, Fattah HA, Osman N, Seliem I. Synthesis of novel imidazole and fused imidazole derivatives as cytotoxic and antimicrobial agents: Molecular docking and biological evaluation. Int J Pharm Sci 2015;7(10):36-45.

Bhat SU, Naikoo RA, Mir MA, Tomar R. Synthesis of tetra-substituted imidazole derivatives by condensation reaction using zeolite H-ZSM 22 as a heterogeneous solid acid catalyst. Int J Curr Pharm Res 2016;8(1):36-9.

Rorije E, Germa F, Philipp B, Schink B, Beimborn DB. Prediction of biodegradability from structure: Imidazoles. SAR QSAR Environ Res 2002;13(1):199-204.

Kaminskas E, Kimhi Y, Magasanik B. Urocanase and N-formimino-L-glutamate formiminohydrolase of Bacillus subtilis, two enzymes of the histidine degradation pathway J Biol Chem 1970;245(14):3536-44.

Kessler D, Rétey J, Schulz GE. Structure and action of urocanase. J Mol Biol 2004;342:183-94.

Tabor H, Mehler AH, Hayaishi O, White J. Urocanic acid as an intermediate in the enzymatic conversion of histidine to glutamic and formic acids. J Biol Chem 1952;196(1):121-8.

Yoshida T, Tada K, Honda Y, Arakawa T. Urocanic aciduria: A defect in the urocanase activity in the liver of a mentally retarded. Tohoku J Exp Med 1971;104(4):305-12.

Radhakrishnan N, Wai LK, Ismail IS. Molecular docking analysis of natural compounds as human neutrophil elastase (HNE) inhibitors. J Chem Pharm Res 2013;5(10):337-46.

Daina A, Michielin O, Zoete V. Swiss ADME: A free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules. Sci Rep 2017;7:42717.

Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ. PatchDock and SymmDock: Servers for rigid and symmetric docking. Nucleic Acids Res 2005;33:W363-7.

Vieira AC, Marschalk C, Biavatti DC, Lorscheider CA, Peralta RM, Seixas FA. Modeling based structural insights into biodegradation of the herbicide diuron by laccase-1 from Ceriporiopsis subvermispora. Bioinformation 2015;11(5):224-8.

Bender RA. Regulation of the histidine utilization (hut) system in bacteria. Microbiol Mol Biol Rev 2012;76(3):565-84.

Castro JS, Trzaskowski B, Deymier PA, Bucay J, Adamowicz L, Hoying JB. Binding affinity of fluorochromes and fluorescent proteins to Taxolâ„¢ crystals. Mater Sci Eng C 2009;29(5):1609-15.

Hai Y, Dugery RJ, Healy D, Christianson DW. Formiminoglutamase from Trypanosoma cruzi is an arginase-like manganese metalloenzyme. Biochemistry 2013;52(51):9294-309.

Published

01-11-2017

How to Cite

Veeraragavan, V., R. Narayanaswamy, and R. Chidambaram. “PREDICTING THE BIODEGRADABILITY NATURE OF IMIDAZOLE AND ITS DERIVATIVES BY MODULATING TWO HISTIDINE DEGRADATION ENZYMES (UROCANASE AND FORMIMINOGLUTAMASE) ACTIVITIES”. Asian Journal of Pharmaceutical and Clinical Research, vol. 10, no. 11, Nov. 2017, pp. 383-6, doi:10.22159/ajpcr.2017.v10i11.20999.

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